Motif View

Internal ID 17656560
Source Database TransTermHP TERM 1494
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1494
Sequence GGCCCGGCGTTTCGCCGGGCC
Look for more occurrences
Start 6053238
End 6053258
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATCAGGTGCGTACTT(5' tail) GGCCCGGCG(5' stem) TTT(loop) CGCCGGGCC(3' stem) TTTCTTTTCTGCCAC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685