Motif View

Internal ID 17656563
Source Database TransTermHP TERM 1497
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1497
Sequence GCGAATGCCCGGCGCTGCCGGGCATTCGC
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Start 6053357
End 6053385
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGCGGAGGGTAAAC(5' tail) GCGAATGCCCGGC(5' stem) AGC(loop) GCCGGGCATTCGC(3' stem) AGCGGCCCCGAGCGG(3' tail). Confidence: 100. overlap 6053356 6053342

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685