Motif View

Internal ID 17656602
Source Database TransTermHP TERM 27
Feature Type terminator
Name
Rho-independent transcription terminator TERM 27
Sequence GCCCGGCCATTGGCCGGGC
Look for more occurrences
Start 143819
End 143837
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCTTGCCTGAAGAA(5' tail) GCCCGGCC(5' stem) ATT(loop) GGCCGGGC(3' stem) TTTTCTTTGGAGGGC(3' tail). Confidence: 100. opp_overlap 143777 143776 143819

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685