Motif View

Internal ID 17656626
Source Database TransTermHP TERM 66
Feature Type terminator
Name
Rho-independent transcription terminator TERM 66
Sequence GGCCACCTGCGGGTGGCC
Look for more occurrences
Start 358271
End 358288
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGCCGAAAAGAAAA(5' tail) GGCCACC(5' stem) TGCG(loop) GGTGGCC(3' stem) TTTTTCATTGGCGCG(3' tail). Confidence: 100. opp_overlap 358266 358271

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685