Motif View

Internal ID 17656763
Source Database TransTermHP TERM 301
Feature Type terminator
Name
Rho-independent transcription terminator TERM 301
Sequence GGCGGCCAGTGGCCGCC
Look for more occurrences
Start 1343266
End 1343282
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGACAAGCAAGAAG(5' tail) GGCGGCC(5' stem) AGT(loop) GGCCGCC(3' stem) TTTTTCGTTATCCGC(3' tail). Confidence: 100. opp_overlap 1343266 1343265

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685