Motif View

Internal ID 17656807
Source Database TransTermHP TERM 366
Feature Type terminator
Name
Rho-independent transcription terminator TERM 366
Sequence CCTGATCCGTAGAGTGAATAACCGCTTGCGGTTATCCGCCCTACGGATCGGG
Look for more occurrences
Start 1548525
End 1548576
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCACATACCGAAGC(5' tail) CCTGATCCGTAGAGTGAATAACCG(5' stem) CTTG(loop) CGGTTATCCGCCCTACGGATCGGG(3' stem) TTCCTGGCATGCACG(3' tail). Confidence: 100. opp_overlap 1548523

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685