Motif View

Internal ID 17657064
Source Database TransTermHP TERM 774
Feature Type terminator
Name
Rho-independent transcription terminator TERM 774
Sequence GGGCGGGCGGCTCCGGTCCGGCGCCGCCCGCCC
Look for more occurrences
Start 3402098
End 3402130
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCTCGACGGAAGAAC(5' tail) GGGCGGGCGGCGCCG(5' stem) GAC(loop) CGGAGCCGCCCGCCC(3' stem) ATGCTCACACGGTGT(3' tail). Confidence: 100. overlap 3402097

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685