Internal ID | 17657072 | Source Database | TransTermHP TERM 787 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 787
|
Sequence |
CGGCCCGCGCGGCCGGCGCCTCCACGCAAGGCGCCGGCCGCGCGGACCG Look for more occurrences |
Start | 3447219 |
End | 3447267 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | GCCCTCTGGAAAGGA(5' tail) CGGTCCGCGCGGCCGGCGCCT(5' stem) TGCGTGG(loop) AGGCGCCGGCCGCGCGGGCCG(3' stem) CGATTCAGAAACTCA(3' tail). Confidence: 100. opp_overlap 3447224, overlap 3447216 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|