Motif View

Internal ID 17657185
Source Database TransTermHP TERM 964
Feature Type terminator
Name
Rho-independent transcription terminator TERM 964
Sequence GGCGCGGTCCGCCGCCGGGCCGCGCC
Look for more occurrences
Start 4266264
End 4266289
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCGCTGAAGCCGAG(5' tail) GGCGCGGTCCG(5' stem) CCGC(loop) CGGGCCGCGCC(3' stem) GTTTCCCCCCGTCCT(3' tail). Confidence: 90. overlap 4266263

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685