Motif View

Internal ID 17657199
Source Database TransTermHP TERM 985
Feature Type terminator
Name
Rho-independent transcription terminator TERM 985
Sequence CGGGAGTCCCCGGAGGGACTCCCG
Look for more occurrences
Start 4383890
End 4383913
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGACGCATAAAAAAA(5' tail) CGGGAGTCCC(5' stem) CGGA(loop) GGGACTCCCG(3' stem) TCTTGAAAGGTCGAG(3' tail). Confidence: 90. opp_overlap 4383890

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685