Motif View

Internal ID 17657214
Source Database TransTermHP TERM 1010
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1010
Sequence CGGCCGGCACTTCGCCGGCCG
Look for more occurrences
Start 4508157
End 4508177
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGACACAACGAAAA(5' tail) CGGCCGGC(5' stem) GAAGT(loop) GCCGGCCG(3' stem) TGGGACAACGAGGGA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685