Motif View

Internal ID 17657258
Source Database TransTermHP TERM 1077
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1077
Sequence GCGCCAGCGGCTGGCGC
Look for more occurrences
Start 4715198
End 4715214
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGACCGGAACGAAAA(5' tail) GCGCCAG(5' stem) CCG(loop) CTGGCGC(3' stem) CATGGAAACGACAAC(3' tail). Confidence: 100. overlap 4715200

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685