Internal ID | 17657262 | Source Database | TransTermHP TERM 1083 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 1083
|
Sequence |
GGCCGCCGGTGCCTCCCCACGCAGGCGGCC Look for more occurrences |
Start | 4727583 |
End | 4727612 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | GCTGCCGAACCGACT(5' tail) GGCCGCCGGTG(5' stem) CCTCCCCA(loop) CGCAGGCGGCC(3' stem) TTTTTTTACCCGCCG(3' tail). Confidence: 100. opp_overlap 4727581 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|