Motif View

Internal ID 17657410
Source Database TransTermHP TERM 1304
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1304
Sequence GCCCCGGCCAAGCGCCGGGGC
Look for more occurrences
Start 5513812
End 5513832
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCCGTCCCAGGAAA(5' tail) GCCCCGGC(5' stem) CAAGC(loop) GCCGGGGC(3' stem) TTTTCGTTCCTGCCC(3' tail). Confidence: 100. opp_overlap 5513812, overlap 5513806

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685