Motif View

Internal ID 17657481
Source Database TransTermHP TERM 1404
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1404
Sequence CGCCCGCCGCATCCGGCGGGCG
Look for more occurrences
Start 5865037
End 5865058
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGGCGAAAACGAAAA(5' tail) CGCCCGCCG(5' stem) GATG(loop) CGGCGGGCG(3' stem) TCGGGTCCTGCGAAT(3' tail). Confidence: 100. overlap 5865020

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685