Motif View

Internal ID 17657557
Source Database TransTermHP TERM 1514
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1514
Sequence GCGGCAGCCCGCGGATACCGGGCTGCCGC
Look for more occurrences
Start 6269920
End 6269948
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGGCATCGGAACGAA(5' tail) GCGGCAGCCCG(5' stem) GTATCCG(loop) CGGGCTGCCGC(3' stem) CATCGACGAGGAAAA(3' tail). Confidence: 93.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685