Motif View

Internal ID 17659772
Source Database TransTermHP TERM 637
Feature Type terminator
Name
Rho-independent transcription terminator TERM 637
Sequence GAAAAGCCCGGCTCAGGCCGGGCTTTTC
Look for more occurrences
Start 2445765
End 2445792
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. syringae B728a chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTAGCCGCTTGTACT(5' tail) GAAAAGCCCGGC(5' stem) TCAG(loop) GCCGGGCTTTTC(3' stem) TTTGCCTGCGATTTG(3' tail). Confidence: 100. opp_overlap 2445770, overlap 2445770

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685