Motif View

Internal ID 17659773
Source Database TransTermHP TERM 638
Feature Type terminator
Name
Rho-independent transcription terminator TERM 638
Sequence GCCCGGCCTGAGCCGGGC
Look for more occurrences
Start 2445770
End 2445787
Strand -
Genomic Context
Replicon Pseudomonas syringae pv. syringae B728a chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCTTGTACTGAAAA(5' tail) GCCCGGC(5' stem) TCAG(loop) GCCGGGC(3' stem) TTTTCTTTGCCTGCG(3' tail). Confidence: 100. opp_overlap 2445770 2445765

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685