Motif View

Internal ID 17663197
Source Database TransTermHP TERM 1406
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1406
Sequence CGGGGCGGCTATAATCGCCGCCCCG
Look for more occurrences
Start 6085980
End 6086004
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTTTCCGATGCCCG(5' tail) CGGGGCGGCTA(5' stem) TAA(loop) TCGCCGCCCCG(3' stem) TTTTGCCGCCACCGC(3' tail). Confidence: 100. overlap 6085951

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685