| Internal ID | 17809180 | Source Database | TransTermHP TERM 57 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 57
|
| Sequence |
CTTTTCCGCACACGGGGCGGCTAGAAGCCGCTCCGCGTCGATAGCG Look for more occurrences |
| Start | 293331 |
| End | 293376 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa PAK genomic scaffold acUKM-supercont-complete, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTTTCACTACGCCCT(5' tail) CTTTTCCGCACACGGGGCGGCT(5' stem) AGA(loop) AGCCGCTCCGCGT-CGATAGCG(3' stem) TTTTTTTCCAGGAGA(3' tail). Confidence: 100. gap 1, opp_overlap 293357, overlap 293333 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|