View alternate annotations in GBrowse or JBrowse

IMP: This is a list of Pseudomonas genomes that are available for viewing with the JBrowse Genome Browser. The list is currently limited to complete genomes, however we may adjust the criteria in the near future to include higher quality draft genomes.

The JBrowse viewer allows you to view multiple annotations from alternate resources as well as view and upload your own annotations including gene predictions and next-generation sequencing data. Please view the help doc on the browser page for more information.

We originally used the GBrowse viewer on this site but is no longer being actively developed by GMOD. We currently still host links to GBrowse views for genomes that were already loaded into GBrowse but we plan to phase them out in the near future. JBrowse has a superior interface for viewing gene annotations/NGS data and has a low performance overhead on our servers.

215 strains returned

= Reference strain, shown first by default
Strain Assembly Level Number of Genes Replicon
Pseudomonas sp. MRSN12121 Complete Genome 6394
MRSN12121 JBrowse
plasmid JBrowse
plasmid pMRVIM0812 JBrowse
Pseudomonas sp. MS586 MS586 Complete Genome 5548
chromosome JBrowse
Pseudomonas sp. Os17 Os17 Complete Genome 6079
chromosome JBrowse
Pseudomonas sp. S-6-2 Complete Genome 3712
chromosome JBrowse
Pseudomonas sp. St29 St29 Complete Genome 6079
chromosome JBrowse
Pseudomonas sp. StFLB209 Complete Genome 5622
chromosome JBrowse
Pseudomonas sp. TCU-HL1 TCU-HL1 Complete Genome 5631
chromosome JBrowse
plasmid pTCUH JBrowse
Pseudomonas sp. TKP Complete Genome 6413
chromosome JBrowse
Pseudomonas sp. URMO17WK12:I11 - Assembly GCF_001511755.1 Complete Genome 5676
chromosome JBrowse
Pseudomonas sp. URMO17WK12:I11 isolate Yellow Complete Genome 4268
chromosome JBrowse
Pseudomonas sp. UW4 Complete Genome 5537
chromosome JBrowse GBrowse
Pseudomonas sp. VLB120 Complete Genome 5580
chromosome JBrowse
plasmid pSTY JBrowse
Pseudomonas stutzeri 19SMN4 Complete Genome 4493
chromosome JBrowse
plasmid. JBrowse
Pseudomonas stutzeri 273 Complete Genome 4599
chromosome JBrowse
Pseudomonas stutzeri 28a24 Complete Genome 4291
chromosome JBrowse
Pseudomonas stutzeri ATCC 17588 = LMG 11199 Complete Genome 4314
chromosome JBrowse GBrowse
Pseudomonas stutzeri CCUG 29243 Complete Genome 4374
chromosome JBrowse GBrowse
Pseudomonas stutzeri DSM 10701 Complete Genome 3888
chromosome JBrowse GBrowse
Pseudomonas stutzeri DSM 4166 Complete Genome 4373
chromosome JBrowse GBrowse
Pseudomonas stutzeri RCH2 Complete Genome 4404
chromosome JBrowse GBrowse
plasmid pPSEST01 JBrowse GBrowse
plasmid pPSEST02 JBrowse GBrowse
plasmid pPSEST03 JBrowse GBrowse