Pseudomonas aeruginosa 105777

Strain Overview
Organism Name Pseudomonas aeruginosa 105777
Species Pseudomonas aeruginosa
Strain 105777
Subspecific Genetic Lineage
Description/Title Pathogen: Pseudomonas aeruginosa clinical sample from wounded military personnel
Scaffolds
Contigs 106
Contig N50 177836
Assembly Level Scaffold
Percent GC
Annotated Genes 6892
References
Partial Genes 122
Cross-References
NCBI BioSample Accession SAMN03076164
NCBI Biosample ID 3076164
NCBI Taxonomy ID 287
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 6892
CDS 6828
pseudo 123
tRNA 56
ncRNA 4
rRNA 3
tmRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 3006
Cytoplasmic Membrane 1404
Periplasmic 180
Outer Membrane 165
Extracellular 75
Unknown 1845
Unknown (This protein may have multiple localization sites) 159
Flagellar 18
Fimbrial 8
Host Associated 1
T3SS 4
Outer Membrane Vesicle 16
Sample Provider
Name SAMMC staff
E-mail arivetba@miamioh.edu
Institution Miami University
Date Collected
Geographic Location
Latitude/Longitude 29.46 N 98.41 W
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606
Host Species Disease infection
Host Species Tissue Sampled wound

Replicons

105 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF