Pseudomonas aeruginosa PAO1, PA2980

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Stover et al., 2000) GCF_000006765.1|latest
Locus Tag	PA2980
Name	Synonym: ycaR
Replicon	chromosome
Genomic location	3338456 - 3338641 (- strand)

Cross-References

RefSeq	NP_251670.1
GI	15598176
Affymetrix	PA2980_at
DNASU	PaCD00007301
Entrez	880502
GenBank	AAG06368.1
INSDC	AAG06368.1
NCBI Locus Tag	PA2980
protein_id(GenBank)	gb|AAG06368.1|AE004723_12|gnl|PseudoCAP|PA2980
TIGR	NTL03PA02980
UniParc	UPI00000C58B2
UniProtKB Acc	Q9HZM4
UniProtKB ID	Y2980_PSEAE
UniRef100	UniRef100_B7V148
UniRef50	UniRef50_B7LN79
UniRef90	UniRef90_B7V148

Product

Feature Type	CDS
Coding Frame	1
Product Name	conserved hypothetical protein Product Name Confidence: Class 4
Synonyms
Evidence for Translation	Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7)	-3.05
Kyte-Doolittle Hydrophobicity Value	-0.126
Molecular Weight (kDa)	6.7
Isoelectric Point (pI)	4.45

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 257 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002602 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA2980

Human Homologs

References