Pseudomonas aeruginosa PAO1, PA3240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3240
Name
Replicon chromosome
Genomic location 3627509 - 3628366 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_251930.1
GI 15598436
Affymetrix PA3240_at
DNASU PaCD00007426
Entrez 882403
GenBank AAG06628.1
INSDC AAG06628.1
NCBI Locus Tag PA3240
protein_id(GenBank) gb|AAG06628.1|AE004747_1|gnl|PseudoCAP|PA3240
TIGR NTL03PA03240
UniParc UPI000013C1F5
UniProtKB Acc Q9HZ00
UniProtKB ID Y3240_PSEAE
UniRef100 UniRef100_Q9HZ00
UniRef50 UniRef50_Q9HZ00
UniRef90 UniRef90_Q9HZ00

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -9.35
Kyte-Doolittle Hydrophobicity Value -0.444
Molecular Weight (kDa) 31.6
Isoelectric Point (pI) 5.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 400 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002368 (825 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3240

Human Homologs

Ensembl 110, assembly GRCh38.p14
pirin [Source:HGNC Symbol;Acc:HGNC:30048]
E-value: 2.5e-48
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
pirin [Source:HGNC Symbol;Acc:HGNC:30048]
E-value: 2.5e-48
Percent Identity: 39.2

References

Identification of pirin, a novel highly conserved nuclear protein.
Wendler WM, Kremmer E, Förster R, Winnacker EL
J Biol Chem 1997 Mar 28;272(13):8482-9
PubMed ID: 9079676