Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3263
|
Name |
rdgC
Synonym: yaiD |
Replicon | chromosome |
Genomic location | 3651056 - 3651976 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
RefSeq | NP_251953.1 |
GI | 15598459 |
Affymetrix | PA3263_at |
DNASU | PaCD00007439 |
Entrez | 882426 |
GenBank | AAG06651.1 |
INSDC | AAG06651.1 |
NCBI Locus Tag | PA3263 |
protein_id(GenBank) | gb|AAG06651.1|AE004748_9|gnl|PseudoCAP|PA3263 |
TIGR | NTL03PA03263 |
UniParc | UPI0000133492 |
UniProtKB Acc | Q9HYX7 |
UniProtKB ID | RDGC_PSEAE |
UniRef100 | UniRef100_Q9HYX7 |
UniRef50 | UniRef50_Q9HYX7 |
UniRef90 | UniRef90_Q9HYX7 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
recombination-associated protein RdgC
|
Synonyms | |
Evidence for Translation |
Detected by iTRAQ (PMID:21863142).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -11.11 |
Kyte-Doolittle Hydrophobicity Value | -0.191 |
Molecular Weight (kDa) | 34.0 |
Isoelectric Point (pI) | 4.73 |
Individual Mappings | |
Additional evidence for subcellular localization |
Detetected in a periplasmic protein preparation by spheroplasting by lysozyme and MgCl2.(PMID:19333994)
|
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
2OWY | DNA BINDING PROTEIN | 02/17/07 | The recombination-associated protein RdgC adopts a novel toroidal architecture for DNA binding | Pseudomonas aeruginosa | 2.5 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 122 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002347 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3263
Search term: rdgC
Search term: recombination-associated protein RdgC
|
Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142
|
The recombination-associated protein RdgC adopts a novel toroidal architecture for DNA binding.
Ha JY, Kim HK, Kim DJ, Kim KH, Oh SJ, Lee HH, Yoon HJ, Song HK, Suh SW
Nucleic Acids Res 2007;35(8):2671-81
PubMed ID: 17426134
|