Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3308
|
Name |
hepA
|
Replicon | chromosome |
Genomic location | 3707090 - 3709942 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_251998.1 |
GI | 15598504 |
Affymetrix | PA3308_hepA_at |
Entrez | 882473 |
GenBank | AAG06696.1 |
NCBI Locus Tag | PA3308 |
protein_id(GenBank) | gb|AAG06696.1|AE004753_4|gnl|PseudoCAP|PA3308 |
TIGR | NTL03PA03308 |
UniProtKB Acc | Q9HYT6 |
UniProtKB ID | RAPA_PSEAE |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA helicase HepA
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -43.32 |
Kyte-Doolittle Hydrophobicity Value | -0.309 |
Molecular Weight (kDa) | 106.8 |
Isoelectric Point (pI) | 4.84 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 317 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002310 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3308
Search term: hepA
Search term: RNA helicase HepA
|
Ensembl
110, assembly
GRCh38.p14
|
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value:
1.0e-05
Percent Identity:
26.5
|
Ensembl
110, assembly
GRCh38.p14
|
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value:
1.0e-05
Percent Identity:
26.5
|
Ensembl
110, assembly
GRCh38.p14
|
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value:
1.0e-05
Percent Identity:
26.5
|
Ensembl
110, assembly
GRCh38.p14
|
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value:
1.0e-05
Percent Identity:
26.5
|
Ensembl
110, assembly
GRCh38.p14
|
chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
E-value:
1.0e-05
Percent Identity:
26.5
|
An expanding family of helicases within the 'DEAD/H' superfamily.
Bork P, Koonin EV
Nucleic Acids Res 1993 Feb 11;21(3):751-2
PubMed ID: 8382805
|
Disruption of Escherichia coli hepA, an RNA polymerase-associated protein, causes UV sensitivity.
Muzzin O, Campbell EA, Xia L, Severinova E, Darst SA, Severinov K
J Biol Chem 1998 Jun 12;273(24):15157-61
PubMed ID: 9614128
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|