Pseudomonas aeruginosa PAO1, PA3420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3420
Name
Replicon chromosome
Genomic location 3826838 - 3829321 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq NP_252110.1
GI 15598616
Affymetrix PA3420_at
Entrez 878745
GenBank AAG06808.1
INSDC AAG06808.1
NCBI Locus Tag PA3420
protein_id(GenBank) gb|AAG06808.1|AE004763_3|gnl|PseudoCAP|PA3420
TIGR NTL03PA03420
UniParc UPI00000C5A01
UniProtKB Acc Q9HYI5
UniProtKB ID Q9HYI5_PSEAE
UniRef100 UniRef100_Q9HYI5
UniRef50 UniRef50_Q9HYI5
UniRef90 UniRef90_Q9HYI5

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -9.32
Kyte-Doolittle Hydrophobicity Value -0.172
Molecular Weight (kDa) 91.8
Isoelectric Point (pI) 6.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 287 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001753 (894 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3420

Human Homologs

References

No references are associated with this feature.