Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3466
|
Name |
Synonym: srmB |
Replicon | chromosome |
Genomic location | 3878033 - 3879373 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
RefSeq | NP_252156.1 |
GI | 15598662 |
Affymetrix | PA3466_at |
Entrez | 877976 |
GenBank | AAG06854.1 |
INSDC | AAG06854.1 |
NCBI Locus Tag | PA3466 |
protein_id(GenBank) | gb|AAG06854.1|AE004767_5|gnl|PseudoCAP|PA3466 |
TIGR | NTL03PA03466 |
UniParc | UPI00000C5A28 |
UniProtKB Acc | Q9HYE0 |
UniProtKB ID | Q9HYE0_PSEAE |
UniRef100 | UniRef100_S0IPA7 |
UniRef50 | UniRef50_A0A098FQD5 |
UniRef90 | UniRef90_B7UWL4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable ATP-dependent RNA helicase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 21.09 |
Kyte-Doolittle Hydrophobicity Value | -0.308 |
Molecular Weight (kDa) | 49.0 |
Isoelectric Point (pI) | 10.49 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002174 (538 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3466
Search term: probable ATP-dependent RNA helicase
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
2.9e-59
Percent Identity:
37.3
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
2.9e-59
Percent Identity:
37.3
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
2.9e-59
Percent Identity:
37.3
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
2.9e-59
Percent Identity:
37.3
|
An eIF-4A-like protein is a suppressor of an Escherichia coli mutant defective in 50S ribosomal subunit assembly.
Nishi K, Morel-Deville F, Hershey JW, Leighton T, Schnier J
Nature 1988 Dec 1;336(6198):496-8
PubMed ID: 2461520
|