Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3622
|
Name |
rpoS
|
Replicon | chromosome |
Genomic location | 4057909 - 4058913 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_252312.1 |
GI | 15598818 |
Affymetrix | PA3622_rpoS_at |
Entrez | 880421 |
GenBank | AAG07010.1 |
INSDC | AAG07010.1 |
NCBI Locus Tag | PA3622 |
protein_id(GenBank) | gb|AAG07010.1|AE004782_8|gnl|PseudoCAP|PA3622 |
TIGR | NTL03PA03622 |
UniParc | UPI00001347E7 |
UniProtKB Acc | P45684 |
UniProtKB ID | RPOS_PSEAE |
UniRef100 | UniRef100_P45684 |
UniRef50 | UniRef50_P45684 |
UniRef90 | UniRef90_P45684 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
sigma factor RpoS
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -11.08 |
Kyte-Doolittle Hydrophobicity Value | -0.547 |
Molecular Weight (kDa) | 38.2 |
Isoelectric Point (pI) | 5.05 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7XL4 | TRANSCRIPTION | 04/21/22 | Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (closed lobe) | Pseudomonas aeruginosa PAO1 | 3.86 | ELECTRON MICROSCOPY | 100.0 |
7VF9 | TRANSCRIPTION | 09/10/21 | Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes | Pseudomonas aeruginosa PAO1 | 4.04 | ELECTRON MICROSCOPY | 100.0 |
7F0R | TRANSCRIPTION/DNA | 06/06/21 | Cryo-EM structure of Pseudomonas aeruginosa SutA transcription activation complex | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT | 5.8 | ELECTRON MICROSCOPY | 100.0 |
7XL3 | TRANSCRIPTION | 04/21/22 | Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (open lobe) | Pseudomonas aeruginosa PAO1 | 3.13 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002052 (534 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3622
Search term: rpoS
Search term: sigma factor RpoS
|
Cloning, analysis and expression of an rpoS homologue gene from Pseudomonas aeruginosa PAO1.
Tanaka K, Takahashi H
Gene 1994 Dec 2;150(1):81-5
PubMed ID: 7959068
|
Effect of rpoS mutation on the stress response and expression of virulence factors in Pseudomonas aeruginosa.
Suh SJ, Silo-Suh L, Woods DE, Hassett DJ, West SE, Ohman DE
J Bacteriol 1999 Jul;181(13):3890-7
PubMed ID: 10383954
|