Pseudomonas aeruginosa PAO1, PA3840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3840
Name
Synonym: ybiN
Replicon chromosome
Genomic location 4302041 - 4303051 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252529.1
GI 15599035
Affymetrix PA3840_at
DNASU PaCD00007674
Entrez 879836
GenBank AAG07227.1
INSDC AAG07227.1
NCBI Locus Tag PA3840
protein_id(GenBank) gb|AAG07227.1|AE004801_5|gnl|PseudoCAP|PA3840
TIGR NTL03PA03840
UniParc UPI00000C5B37
UniProtKB Acc Q9HXG4
UniProtKB ID RLMF_PSEAE
UniRef100 UniRef100_B7UVS7
UniRef50 UniRef50_A6V0S3
UniRef90 UniRef90_A6V0S3

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 6.80
Kyte-Doolittle Hydrophobicity Value -0.405
Molecular Weight (kDa) 37.6
Isoelectric Point (pI) 9.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 73 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001826 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3840

Human Homologs

Ensembl 110, assembly GRCh38.p14
methyltransferase 16, N6-methyladenosine [Source:HGNC Symbol;Acc:HGNC:28484]
E-value: 4.1e-34
Percent Identity: 29.9

References

No references are associated with this feature.