Pseudomonas aeruginosa PAO1, PA3883

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3883
Name
Replicon chromosome
Genomic location 4349502 - 4350332 (+ strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252572.1
GI 15599078
Affymetrix PA3883_at
Entrez 878763
GenBank AAG07270.1
INSDC AAG07270.1
NCBI Locus Tag PA3883
protein_id(GenBank) gb|AAG07270.1|AE004805_8|gnl|PseudoCAP|PA3883
TIGR NTL03PA03883
UniParc UPI00000C5B58
UniProtKB Acc Q9HXC9
UniProtKB ID Q9HXC9_PSEAE
UniRef100 UniRef100_W0YVT3
UniRef50 UniRef50_Q48MJ9
UniRef90 UniRef90_A6V0M5

Product

Feature Type CDS
Coding Frame 1
Product Name
probable short-chain dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 6.18
Kyte-Doolittle Hydrophobicity Value 0.073
Molecular Weight (kDa) 29.4
Isoelectric Point (pI) 10.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 649 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001788 (870 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3883

Human Homologs

Ensembl 110, assembly GRCh38.p14
retinol dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:14423]
E-value: 1.9e-16
Percent Identity: 34.4
Ensembl 110, assembly GRCh38.p14
retinol dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:14423]
E-value: 1.9e-16
Percent Identity: 34.4

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295