Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4542
|
Name |
clpB
|
Replicon | chromosome |
Genomic location | 5087408 - 5089972 (- strand) |
Transposon Mutants | 11 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 3 transposon mutants in orthologs |
RefSeq | NP_253232.1 |
GI | 15599738 |
Affymetrix | PA4542_clpB_at |
Entrez | 879457 |
GenBank | AAG07930.1 |
INSDC | AAG07930.1 |
NCBI Locus Tag | PA4542 |
protein_id(GenBank) | gb|AAG07930.1|AE004868_1|gnl|PseudoCAP|PA4542 |
TIGR | NTL03PA04543 |
UniParc | UPI00000C5D5D |
UniProtKB Acc | Q9HVN5 |
UniProtKB ID | CLPB_PSEAE |
UniRef100 | UniRef100_Q9HVN5 |
UniRef50 | UniRef50_P63284-2 |
UniRef90 | UniRef90_Q9HVN5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ClpB protein
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -20.58 |
Kyte-Doolittle Hydrophobicity Value | -0.346 |
Molecular Weight (kDa) | 95.0 |
Isoelectric Point (pI) | 5.13 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 598 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000451 (857 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4542
Search term: clpB
Search term: ClpB protein
|
Ensembl
110, assembly
GRCh38.p14
|
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
3.8e-52
Percent Identity:
36.4
|
Ensembl
110, assembly
GRCh38.p14
|
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
3.8e-52
Percent Identity:
36.4
|
Ensembl
110, assembly
GRCh38.p14
|
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
3.8e-52
Percent Identity:
36.4
|
Conservation of the regulatory subunit for the Clp ATP-dependent protease in prokaryotes and eukaryotes.
Gottesman S, Squires C, Pichersky E, Carrington M, Hobbs M, Mattick JS, Dalrymple B, Kuramitsu H, Shiroza T, Foster T
Proc Natl Acad Sci U S A 1990 May;87(9):3513-7
PubMed ID: 2185473
|
ClpB is the Escherichia coli heat shock protein F84.1.
Squires CL, Pedersen S, Ross BM, Squires C
J Bacteriol 1991 Jul;173(14):4254-62
PubMed ID: 2066329
|
Mutational analysis of the two ATP-binding sites in ClpB, a heat shock protein with protein-activated ATPase activity in Escherichia coli.
Kim KI, Woo KM, Seong IS, Lee ZW, Baek SH, Chung CH
Biochem J 1998 Aug 1;333 ( Pt 3)(Pt 3):671-6
PubMed ID: 9677327
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|