Pseudomonas aeruginosa PAO1, PA5150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5150
Name
Replicon chromosome
Genomic location 5798693 - 5799430 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_253837.1
GI 15600343
Affymetrix PA5150_at
DNASU PaCD00008215
Entrez 879973
GenBank AAG08535.1
INSDC AAG08535.1
NCBI Locus Tag PA5150
protein_id(GenBank) gb|AAG08535.1|AE004928_1|gnl|PseudoCAP|PA5150
TIGR NTL03PA05151
UniParc UPI00000C5F28
UniProtKB Acc Q9HU34
UniProtKB ID Q9HU34_PSEAE
UniRef100 UniRef100_W0YZU9
UniRef50 UniRef50_W6KBF6
UniRef90 UniRef90_B7V3P4

Product

Feature Type CDS
Coding Frame 1
Product Name
probable short-chain dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -4.66
Kyte-Doolittle Hydrophobicity Value -0.006
Molecular Weight (kDa) 26.2
Isoelectric Point (pI) 6.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Cytoplasmic Class 2
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 650 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004743 (702 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5150

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 14 [Source:HGNC Symbol;Acc:HGNC:23238]
E-value: 4.2e-20
Percent Identity: 30.6

References

No references are associated with this feature.