Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5162
|
Name |
rmlD
Synonym: rfbD |
Replicon | chromosome |
Genomic location | 5811336 - 5812244 (+ strand) |
Transposon Mutants | 1 transposon mutants in PAO1 |
RefSeq | NP_253849.1 |
GI | 15600355 |
Affymetrix | PA5162_rmlD_at |
Entrez | 879983 |
GenBank | AAG08547.1 |
INSDC | AAG08547.1 |
NCBI Locus Tag | PA5162 |
protein_id(GenBank) | gb|AAG08547.1|AE004929_2|gnl|PseudoCAP|PA5162 |
TIGR | NTL03PA05163 |
UniParc | UPI00000DC6E2 |
UniProtKB Acc | Q9HU23 |
UniProtKB ID | Q9HU23_PSEAE |
UniRef100 | UniRef100_Q9HU23 |
UniRef50 | UniRef50_Q48MY2 |
UniRef90 | UniRef90_A6VDT3 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
dTDP-4-dehydrorhamnose reductase
|
Synonyms |
dTDP-L-rhamnose synthetase dTDP-6-deoxy-L-mannose dehydrogenase |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -2.92 |
Kyte-Doolittle Hydrophobicity Value | -0.150 |
Molecular Weight (kDa) | 33.1 |
Isoelectric Point (pI) | 6.05 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 492 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004753 (531 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5162
Search term: rmlD
Search term: dTDP-4-dehydrorhamnose reductase
|
Structure of the O antigen of Escherichia coli K-12 and the sequence of its rfb gene cluster.
Stevenson G, Neal B, Liu D, Hobbs M, Packer NH, Batley M, Redmond JW, Lindquist L, Reeves P
J Bacteriol 1994 Jul;176(13):4144-56
PubMed ID: 7517391
|
Genetic analysis of the dTDP-rhamnose biosynthesis region of the Escherichia coli VW187 (O7:K1) rfb gene cluster: identification of functional homologs of rfbB and rfbA in the rff cluster and correct location of the rffE gene.
Marolda CL, Valvano MA
J Bacteriol 1995 Oct;177(19):5539-46
PubMed ID: 7559340
|
Characterization of dTDP-4-dehydrorhamnose 3,5-epimerase and dTDP-4-dehydrorhamnose reductase, required for dTDP-L-rhamnose biosynthesis in Salmonella enterica serovar Typhimurium LT2.
Graninger M, Nidetzky B, Heinrichs DE, Whitfield C, Messner P
J Biol Chem 1999 Aug 27;274(35):25069-77
PubMed ID: 10455186
|
Purification, characterization and HPLC assay of Salmonella glucose-1-phosphate thymidylyl-transferase from the cloned rfbA gene.
Lindquist L, Kaiser R, Reeves PR, Lindberg AA
Eur J Biochem 1993 Feb 1;211(3):763-70
PubMed ID: 8382158
|