Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5239
|
Name |
rho
|
Replicon | chromosome |
Genomic location | 5898865 - 5900124 (- strand) |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_253926.1 |
GI | 15600432 |
Affymetrix | PA5239_rho_at |
DNASU | PaCD00008256 |
Entrez | 880855 |
GenBank | AAG08624.1 |
INSDC | AAG08624.1 |
NCBI Locus Tag | PA5239 |
protein_id(GenBank) | gb|AAG08624.1|AE004936_7|gnl|PseudoCAP|PA5239 |
TIGR | NTL03PA05240 |
UniParc | UPI00000C5F6F |
UniProtKB Acc | Q9HTV1 |
UniProtKB ID | RHO_PSEAE |
UniRef100 | UniRef100_Q9HTV1 |
UniRef50 | UniRef50_Q9HTV1 |
UniRef90 | UniRef90_Q9HTV1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
transcription termination factor Rho
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -0.58 |
Kyte-Doolittle Hydrophobicity Value | -0.364 |
Molecular Weight (kDa) | 47.1 |
Isoelectric Point (pI) | 6.82 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 544 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004819 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5239
Search term: rho
Search term: transcription termination factor Rho
|
Site-directed alterations in the ATP-binding domain of rho protein affect its activities as a termination factor.
Dombroski AJ, Brennan CA, Spear P, Platt T
J Biol Chem 1988 Dec 15;263(35):18802-9
PubMed ID: 2461932
|
Phylogenetic analysis of sequences from diverse bacteria with homology to the Escherichia coli rho gene.
Opperman T, Richardson JP
J Bacteriol 1994 Aug;176(16):5033-43
PubMed ID: 8051015
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|