Motif View

Internal ID 17655747
Source Database TransTermHP TERM 227
Feature Type terminator
Name
Rho-independent transcription terminator TERM 227
Sequence TGGCAGCGCCA
Look for more occurrences
Start 948741
End 948751
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGTATTCCTACAG(5' tail) TGGC(5' stem) AGC(loop) GCCA(3' stem) TTTTTTCTCGTTAGA(3' tail). Confidence: 91.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685