Motif View

Internal ID 17656225
Source Database TransTermHP TERM 984
Feature Type terminator
Name
Rho-independent transcription terminator TERM 984
Sequence GGGAGCCAGGCGGCTCCC
Look for more occurrences
Start 4252627
End 4252644
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACGGAAGGGAAAAAA(5' tail) GGGAGCC(5' stem) AGGC(loop) GGCTCCC(3' stem) TTTTTTCATGGGCAT(3' tail). Confidence: 100. opp_overlap 4252627 4252618

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685