Motif View

Internal ID 17656604
Source Database TransTermHP TERM 29
Feature Type terminator
Name
Rho-independent transcription terminator TERM 29
Sequence GGCATGGTCGGTAACGACCATGCC
Look for more occurrences
Start 145438
End 145461
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGAAAAAGAAAAAA(5' tail) GGCATGGTCG(5' stem) TTAC(loop) CGACCATGCC(3' stem) TGTTGTCGTCAGCCT(3' tail). Confidence: 100. opp_overlap 145438 145436

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685