Motif View

Internal ID 17656686
Source Database TransTermHP TERM 157
Feature Type terminator
Name
Rho-independent transcription terminator TERM 157
Sequence GGCCGGTCGCAACCGGCC
Look for more occurrences
Start 716977
End 716994
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAACCCCATGAAAAA(5' tail) GGCCGGT(5' stem) TGCG(loop) ACCGGCC(3' stem) TTTTTCATGGGTGCT(3' tail). Confidence: 100. opp_overlap 716977 716966 716962

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685