Motif View

Internal ID 17656753
Source Database TransTermHP TERM 278
Feature Type terminator
Name
Rho-independent transcription terminator TERM 278
Sequence CGCTCGCCGCCCCGCGTACGGGGCGGCGTCG
Look for more occurrences
Start 1283403
End 1283433
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCTGGTCGGTTGAG(5' tail) CGCTCGCCGCCCCG(5' stem) CGTA(loop) CGGGGCGGCGT-CG(3' stem) TTTCAGCGGTTGGCC(3' tail). Confidence: 91. gap 1, overlap 1283407

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685