Pseudomonas aeruginosa PAO1, PA0295

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0019810	putrescine binding	ISS Inferred from Sequence or Structural Similarity Term mapped from: PDB:1A99	ECO:0007090	31631799	Reviewed by curator
Cellular Component	GO:0042597	periplasmic space	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00909	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0019808	polyamine binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00909	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0015846	polyamine transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00909	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae02024	Quorum sensing	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF13416	Bacterial extracellular solute-binding protein	IPR006059	Bacterial extracellular solute-binding protein	36	310	2.9E-27
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	147	161	1.1E-38
SUPERFAMILY	SSF53850	Periplasmic binding protein-like II	-	-	20	348	3.23E-78
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	117	133	1.1E-38
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	296	322	1.1E-38
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	26	42	1.1E-38
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	170	189	1.1E-38
PANTHER	PTHR30222	SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN	-	-	17	348	4.4E-73
Gene3D	G3DSA:3.40.190.10	-	-	-	23	318	2.6E-107
CDD	cd13659	PBP2_PotF	-	-	22	345	0.0
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	251	270	1.1E-38
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	42	63	1.1E-38
Gene3D	G3DSA:3.40.190.10	-	-	-	126	346	2.6E-107
PIRSF	PIRSF019574	Periplasmic_polyamine_BP	IPR001188	Spermidine/putrescine-binding periplasmic protein	4	352	1.3E-97
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	207	226	1.1E-38
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	84	97	1.1E-38

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.