Pseudomonas aeruginosa PAO1, PA0297 (spuA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0046203 spermidine catabolic process
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 21622750 Reviewed by curator
Molecular Function GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43235
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07722
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class
Carbon compound catabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Polyamine catabolism ECO:0000037
not_recorded
PseudoCyc PWY-7221 guanosine ribonucleotides de novo biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52317 Class I glutamine amidotransferase-like IPR029062 Class I glutamine amidotransferase-like 4 246 1.92E-39
CDD cd01745 GATase1_2 - - 7 240 1.11293E-76
Pfam PF07722 Peptidase C26 IPR011697 Peptidase C26 5 223 2.0E-77
PANTHER PTHR43235 GLUTAMINE AMIDOTRANSFERASE PB2B2.05-RELATED IPR044668 Peptidase C26, gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD-like 4 242 3.4E-42
Gene3D G3DSA:3.40.50.880 - IPR029062 Class I glutamine amidotransferase-like 2 250 1.3E-64
MobiDBLite mobidb-lite consensus disorder prediction - - 70 91 -
FunFam G3DSA:3.40.50.880:FF:000030 Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD - - 2 250 3.4E-99

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.