Pseudomonas aeruginosa PAO1, PA0300 (spuD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0015846	polyamine transport	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	12081945	Reviewed by curator
Molecular Function	GO:0019810	putrescine binding	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	22300763	Reviewed by curator
Biological Process	GO:0015846	polyamine transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF019574	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0019808	polyamine binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF019574	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0042597	periplasmic space	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF019574	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	311	337	3.3E-69
PIRSF	PIRSF019574	Periplasmic_polyamine_BP	IPR001188	Spermidine/putrescine-binding periplasmic protein	1	367	0.0
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	76	90	3.3E-69
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	266	285	3.3E-69
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	92	105	3.3E-69
CDD	cd13659	PBP2_PotF	-	-	29	360	0.0
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	156	170	3.3E-69
Gene3D	G3DSA:3.40.190.10	-	-	-	134	361	0.0
Pfam	PF13416	Bacterial extracellular solute-binding protein	IPR006059	Bacterial extracellular solute-binding protein	44	331	7.2E-31
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	125	141	3.3E-69
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	216	235	3.3E-69
Gene3D	G3DSA:3.40.190.10	-	-	-	30	333	0.0
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	179	198	3.3E-69
SUPERFAMILY	SSF53850	Periplasmic binding protein-like II	-	-	28	366	1.7E-105
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	49	70	3.3E-69
PRINTS	PR00909	Bacterial periplasmic spermidine/putrescine-binding protein signature	IPR001188	Spermidine/putrescine-binding periplasmic protein	33	49	3.3E-69
PANTHER	PTHR30222	SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN	-	-	10	363	2.5E-95

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.