Pseudomonas aeruginosa PAO1, PA0715

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003723	RNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:cd03487	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006278	RNA-dependent DNA biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:cd03487	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003964	RNA-directed DNA polymerase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:cd03487	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Related to phage, transposon, or plasmid Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	IPR000477	Reverse transcriptase domain	40	235	2.2E-17
CDD	cd03487	RT_Bac_retron_II	IPR000123	RNA-directed DNA polymerase (reverse transcriptase), msDNA	40	255	6.11446E-64
SUPERFAMILY	SSF56672	DNA/RNA polymerases	IPR043502	DNA/RNA polymerase superfamily	39	260	2.34E-9
PANTHER	PTHR34047	NUCLEAR INTRON MATURASE 1, MITOCHONDRIAL-RELATED	-	-	57	237	3.7E-20
PRINTS	PR00866	RNA-dependent DNA-polymerase (msDNA) signature	IPR000123	RNA-directed DNA polymerase (reverse transcriptase), msDNA	142	155	7.0E-11
PRINTS	PR00866	RNA-dependent DNA-polymerase (msDNA) signature	IPR000123	RNA-directed DNA polymerase (reverse transcriptase), msDNA	175	186	7.0E-11
PRINTS	PR00866	RNA-dependent DNA-polymerase (msDNA) signature	IPR000123	RNA-directed DNA polymerase (reverse transcriptase), msDNA	89	107	7.0E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.