Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0046903 | secretion | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
1427098 | Reviewed by curator |
Biological Process | GO:0015031 | protein transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01843
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01843
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
PseudoCAP | Apr type I secretion system |
ECO:0000037
not_recorded |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR01490 | Gram-negative bacterial RTX secretion protein D signature | - | - | 21 | 44 | 7.0E-63 |
Coils | Coil | Coil | - | - | 92 | 112 | - |
Gene3D | G3DSA:2.40.50.100 | - | - | - | 54 | 124 | 6.6E-6 |
Pfam | PF00529 | Cation efflux system protein CusB domain 1 | IPR043602 | Cation efflux system protein CusB, domain 1 | 23 | 388 | 2.1E-20 |
SUPERFAMILY | SSF111369 | HlyD-like secretion proteins | - | - | 54 | 111 | 3.01E-6 |
PRINTS | PR01490 | Gram-negative bacterial RTX secretion protein D signature | - | - | 411 | 431 | 7.0E-63 |
PRINTS | PR01490 | Gram-negative bacterial RTX secretion protein D signature | - | - | 63 | 83 | 7.0E-63 |
PRINTS | PR01490 | Gram-negative bacterial RTX secretion protein D signature | - | - | 329 | 353 | 7.0E-63 |
NCBIfam | TIGR01843 | JCVI: HlyD family type I secretion periplasmic adaptor subunit | IPR010129 | Type I secretion membrane fusion protein, HlyD family | 12 | 431 | 3.2E-121 |
PRINTS | PR01490 | Gram-negative bacterial RTX secretion protein D signature | - | - | 296 | 317 | 7.0E-63 |
PRINTS | PR01490 | Gram-negative bacterial RTX secretion protein D signature | - | - | 353 | 376 | 7.0E-63 |
PRINTS | PR01490 | Gram-negative bacterial RTX secretion protein D signature | - | - | 396 | 411 | 7.0E-63 |
Gene3D | G3DSA:2.40.30.170 | - | - | - | 304 | 414 | 4.7E-7 |
PANTHER | PTHR30386 | MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP | - | - | 10 | 426 | 3.7E-80 |
Coils | Coil | Coil | - | - | 149 | 176 | - |
Coils | Coil | Coil | - | - | 208 | 228 | - |