Pseudomonas aeruginosa PAO1, PA1257 (lhpN)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0034589	hydroxyproline transport	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	18833300	Reviewed by curator
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30614	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0071705	nitrogen compound transport	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01726	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0022857	transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01726	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30614	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0043190	ATP-binding cassette (ABC) transporter complex	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01726	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class Transport of small molecules Other PAO1 genes in this class Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd06261	TM_PBP2	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	18	197	3.00475E-12
SUPERFAMILY	SSF161098	MetI-like	IPR035906	MetI-like superfamily	14	198	2.49E-38
Pfam	PF00528	Binding-protein-dependent transport system inner membrane component	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	33	212	1.3E-16
Gene3D	G3DSA:1.10.3720.10	-	IPR035906	MetI-like superfamily	5	214	1.9E-43
PANTHER	PTHR30614	MEMBRANE COMPONENT OF AMINO ACID ABC TRANSPORTER	IPR043429	ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like	11	213	9.0E-49
NCBIfam	TIGR01726	JCVI: ABC transporter permease subunit, His/Glu/Gln/Arg/opine family, N-terminal region	IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain	12	107	1.5E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.