Pseudomonas aeruginosa PAO1, PA1327

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00839
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008236 serine-type peptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00839
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01223
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01223
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01223
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR13966 ENDONUCLEASE RELATED IPR040255 Non-specific endonuclease 28 608 1.2E-39
PRINTS PR00839 V8 serine protease family signature IPR008256 Peptidase S1B 282 298 1.0E-10
CDD cd00091 NUC - - 391 605 2.27759E-69
Gene3D G3DSA:2.40.10.10 - IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold 113 224 3.2E-12
Gene3D G3DSA:2.40.10.10 - IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold 225 322 3.2E-12
PRINTS PR00839 V8 serine protease family signature IPR008256 Peptidase S1B 134 151 1.0E-10
SUPERFAMILY SSF50494 Trypsin-like serine proteases IPR009003 Peptidase S1, PA clan 107 330 1.05E-24
Pfam PF13365 Trypsin-like peptidase domain - - 134 308 5.5E-17
Gene3D G3DSA:3.40.570.10 Extracellular Endonuclease, subunit A IPR044929 DNA/RNA non-specific endonuclease superfamily 379 607 4.5E-51
FunFam G3DSA:3.40.570.10:FF:000013 Serine protease - - 379 610 4.9E-109
PRINTS PR00839 V8 serine protease family signature IPR008256 Peptidase S1B 300 312 1.0E-10
SUPERFAMILY SSF54060 His-Me finger endonucleases IPR044925 His-Me finger superfamily 386 601 2.53E-45
Pfam PF01223 DNA/RNA non-specific endonuclease IPR001604 DNA/RNA non-specific endonuclease 390 603 4.5E-51
SMART SM00892 Endonuclease_NS_2 IPR001604 DNA/RNA non-specific endonuclease 396 604 4.5E-57
SMART SM00477 endoplus IPR020821 Extracellular Endonuclease, subunit A 397 604 1.2E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.