Pseudomonas aeruginosa PAO1, PA1436

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 361 382 5.6E-60
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 609 623 5.6E-60
PANTHER PTHR32063 - IPR001036 Acriflavin resistance protein 6 1021 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 442 465 5.6E-60
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 45 129 1.1E-19
Gene3D G3DSA:1.20.1640.10 Multidrug efflux transporter AcrB transmembrane domain - - 13 504 0.0
Gene3D G3DSA:3.30.2090.10 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 708 798 0.0
Pfam PF00873 AcrB/AcrD/AcrF family IPR001036 Acriflavin resistance protein 9 1014 0.0
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 555 652 1.78E-13
SUPERFAMILY SSF82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 187 267 2.62E-15
Gene3D G3DSA:3.30.70.1320 Multidrug efflux transporter AcrB pore domain like - - 139 329 0.0
Gene3D G3DSA:3.30.2090.10 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 184 276 0.0
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain - - 294 494 1.01E-44
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 467 490 5.6E-60
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 42 60 5.6E-60
SUPERFAMILY SSF82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 710 789 6.8E-16
Gene3D G3DSA:1.20.1640.10 Multidrug efflux transporter AcrB transmembrane domain - - 505 1012 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 542 559 5.6E-60
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 14 38 5.6E-60
Gene3D G3DSA:3.30.70.1440 Multidrug efflux transporter AcrB pore domain - - 658 858 0.0
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain - - 794 1018 2.09E-44
Gene3D G3DSA:3.30.70.1430 Multidrug efflux transporter AcrB pore domain - - 44 806 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 334 357 5.6E-60
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 141 328 1.99E-23
Gene3D G3DSA:3.30.70.1430 Multidrug efflux transporter AcrB pore domain - - 560 657 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 389 413 5.6E-60

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.