Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0009142 | nucleoside triphosphate biosynthetic process | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
10671455 | Reviewed by curator |
Biological Process | GO:0046777 | protein autophosphorylation | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
10671455 | Reviewed by curator |
Molecular Function | GO:0004550 | nucleoside diphosphate kinase activity | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
10671455 | Reviewed by curator |
Molecular Function | GO:0004775 | succinate-CoA ligase (ADP-forming) activity | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
10671455 | Reviewed by curator |
Cellular Component | GO:0042709 | succinate-CoA ligase complex | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
10671455 | Reviewed by curator |
Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00549
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1490.20
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006099 | tricarboxylic acid cycle |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00558
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pae00660 | C5-Branched dibasic acid metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae01120 | Microbial metabolism in diverse environments | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | TCA | TCA cycle I (prokaryotic) | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
PseudoCyc | TCA-GLYOX-BYPASS | superpathway of glyoxylate bypass and TCA | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
PseudoCAP | Citrate cycle (TCA cycle) |
ECO:0000037
not_recorded |
|||
KEGG | pae00020 | Citrate cycle (TCA cycle) | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | P22-PWY | acetyl-CoA assimilation | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae01200 | Carbon metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | GLUTAMOLYSIS-PWY | glutamate degradation III | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
PseudoCAP | C5-Branched dibasic acid metabolism |
ECO:0000037
not_recorded |
|||
KEGG | pae01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
PseudoCyc | GLYCOLYSIS-TCA-GLYOX-BYPASS | superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
KEGG | pae00640 | Propanoate metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:3.40.50.261:FF:000001 | Succinate--CoA ligase [ADP-forming] subunit beta | - | - | 240 | 387 | 4.4E-72 |
Pfam | PF08442 | ATP-grasp domain | IPR013650 | ATP-grasp fold, succinyl-CoA synthetase-type | 2 | 203 | 9.1E-83 |
PANTHER | PTHR11815 | SUCCINYL-COA SYNTHETASE BETA CHAIN | IPR005809 | Succinate--CoA synthetase, beta subunit | 1 | 385 | 0.0 |
Hamap | MF_00558 | Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. | IPR005809 | Succinate--CoA synthetase, beta subunit | 1 | 386 | 43.519451 |
Gene3D | G3DSA:3.40.50.261 | - | IPR016102 | Succinyl-CoA synthetase-like | 240 | 388 | 8.1E-60 |
Gene3D | G3DSA:3.30.470.20 | - | - | - | 1 | 237 | 1.9E-102 |
FunFam | G3DSA:3.30.1490.20:FF:000002 | Succinate--CoA ligase [ADP-forming] subunit beta | - | - | 21 | 104 | 3.5E-40 |
NCBIfam | TIGR01016 | JCVI: succinate-CoA ligase subunit beta | IPR005809 | Succinate--CoA synthetase, beta subunit | 1 | 385 | 0.0 |
PIRSF | PIRSF001554 | SucCS_beta | IPR005809 | Succinate--CoA synthetase, beta subunit | 1 | 388 | 0.0 |
SUPERFAMILY | SSF52210 | Succinyl-CoA synthetase domains | IPR016102 | Succinyl-CoA synthetase-like | 240 | 384 | 8.9E-54 |
FunFam | G3DSA:3.30.470.20:FF:000002 | Succinate--CoA ligase [ADP-forming] subunit beta | - | - | 93 | 237 | 2.1E-50 |
Pfam | PF00549 | CoA-ligase | IPR005811 | ATP-citrate lyase/succinyl-CoA ligase | 262 | 382 | 1.5E-24 |
SUPERFAMILY | SSF56059 | Glutathione synthetase ATP-binding domain-like | - | - | 1 | 237 | 1.9E-82 |
Gene3D | G3DSA:3.30.1490.20 | - | IPR013815 | ATP-grasp fold, subdomain 1 | 21 | 104 | 1.9E-102 |