Pseudomonas aeruginosa PAO1, PA1658 (hsiC2)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IGC Inferred from Genomic Context	ECO:0000317 genomic context evidence used in manual assertion	18524912	Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF05943	EvpB/VC_A0108, tail sheath N-terminal domain	IPR044031	TssC1, N-terminal	65	364	1.7E-130
NCBIfam	TIGR03355	JCVI: type VI secretion system contractile sheath large subunit	IPR010269	Type VI secretion system TssC-like	17	489	0.0
PANTHER	PTHR35565	CYTOPLASMIC PROTEIN-RELATED	IPR010269	Type VI secretion system TssC-like	3	491	0.0
Pfam	PF18945	EvpB/VC_A0108, tail sheath gpW/gp25-like domain	IPR044032	TssC1, C-terminal	378	488	2.5E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.